| Protein ZmMYBR94 | |
|---|---|
|
ZmMYBR94 is a protein in the MYB-related family.
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| Information | |
| TF Name: | ZmMYBR94 |
| Species: | Maize |
| TF Family: | MYB-related |
| Gene Name(Synonym): | MYBR94 |
| Uniprot ID: | A0A1D6PDQ1 |
Protein ZmMYBR94
ZmMYBR94 is a protein in the MYB-related family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.
| Overview of domains present in v5 transcripts | ||
|---|---|---|
| PF00249 | PF13921 | |
| Zm00001eb244750_T001 |  | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d016914 | DAPseq |  |
sequence | fimo | position |
| Zm00001d016914 | DAPseq |  |
sequence | fimo | position |
| Zm00001d016914 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d016914 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmMYBR94 is the regulator
Interactions where ZmMYBR94 is the target
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Zm00001eb244750_T001 from maize genome v5
Amino Acid Sequence
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MRRSDVSASLPRALFPVARPPPYPYPYHLYQYPPSSYGQPPTSQAGIQASFPVRSYAPPPPAADGSQASFQIPSYAPPPY
APPPYGVPPYAPYAPPPYGAPHSYAPPTYGAPPPVAPLSVGSENQAEENPVPKEKRPKRLEWTKEDEEKLVNAWFMHSND
PISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNREVTKFNGFYLQEERLRQSGADDAMVMDATMARFEGK
IGHPFKRHHWWQVVRHEPKWSAKHDLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPVGHDRAKAAAGKTKTKGKG
KEATSSESTSEAFKMKNLWGGLVKAKLLKQ
MRRSDVSASLPRALFPVARPPPYPYPYHLYQYPPSSYGQPPTSQAGIQASFPVRSYAPPPPAADGSQASFQIPSYAPPPY
APPPYGVPPYAPYAPPPYGAPHSYAPPTYGAPPPVAPLSVGSENQAEENPVPKEKRPKRLEWTKEDEEKLVNAWFMHSND
PISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNREVTKFNGFYLQEERLRQSGADDAMVMDATMARFEGK
IGHPFKRHHWWQVVRHEPKWSAKHDLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPVGHDRAKAAAGKTKTKGKG
KEATSSESTSEAFKMKNLWGGLVKAKLLKQ
MRRSDVSASLPRALFPVARPPPYPYPYHLYQYPPSSYGQPPTSQAGIQASFPVRSYAPPPPAADGSQASFQIPSYAPPPY
APPPYGVPPYAPYAPPPYGAPHSYAPPTYGAPPPVAPLSVGSENQAEENPVPKEKRPKRLEWTKEDEEKLVNAWFMHSND
PISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNREVTKFNGFYLQEERLRQSGADDAMVMDATMARFEGK
IGHPFKRHHWWQVVRHEPKWSAKHDLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPVGHDRAKAAAGKTKTKGKG
KEATSSESTSEAFKMKNLWGGLVKAKLLKQ
MRRSDVSASLPRALFPVARPPPYPYPYHLYQYPPSSYGQPPTSQAGIQASFPVRSYAPPPPAADGSQASFQIPSYAPPPY
APPPYGVPPYAPYAPPPYGAPHSYAPPTYGAPPPVAPLSVGSENQAEENPVPKEKRPKRLEWTKEDEEKLVNAWFMHSND
PISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNREVTKFNGFYLQEERLRQSGADDAMVMDATMARFEGK
IGHPFKRHHWWQVVRHEPKWSAKHDLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPVGHDRAKAAAGKTKTKGKG
KEATSSESTSEAFKMKNLWGGLVKAKLLKQ
MRRSDVSASLPRALFPVARPPPYPYPYHLYQYPPSSYGQPPTSQAGIQASFPVRSYAPPPPAADGSQASFQIPSYAPPPY
APPPYGVPPYAPYAPPPYGAPHSYAPPTYGAPPPVAPLSVGSENQAEENPVPKEKRPKRLEWTKEDEEKLVNAWFMHSND
PISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNREVTKFNGFYLQEERLRQSGADDAMVMDATMARFEGK
IGHPFKRHHWWQVVRHEPKWSAKHDLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPVGHDRAKAAAGKTKTKGKG
KEATSSESTSEAFKMKNLWGGLVKAKLLKQ
MRRSDVSASLPRALFPVARPPPYPYPYHLYQYPPSSYGQPPTSQAGIQASFPVRSYAPPPPAADGSQASFQIPSYAPPPY
APPPYGVPPYAPYAPPPYGAPHSYAPPTYGAPPPVAPLSVGSENQAEENPVPKEKRPKRLEWTKEDEEKLVNAWFMHSND
PISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNREVTKFNGFYLQEERLRQSGADDAMVMDATMARFEGK
IGHPFKRHHWWQVVRHEPKWSAKHDLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPVGHDRAKAAAGKTKTKGKG
KEATSSESTSEAFKMKNLWGGLVKAKLLKQ
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00249 |
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| PF13921 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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ATGCGTCGCTCCGATGTTTCAGCCT...
ATGCGTCGCTCCGATGTTTCAGCCTCACTCCCCCGTGCACTATTTCCGGTTGCGCGTCCACCACCATACCCTTATCCCTATCATTTGTATCAATATCCACCGTCTTCATATGGTCAACCTCCAACTTCCCAAGCCGGAATTCAAGCCTCATTCCCGGTACGTTCGTATGCCCCTCCCCCACCTGCTGCGGACGGAAGTCAAGCTTCTTTCCAGATACCTTCATACGCCCCTCCTCCATATGCTCCACCTCCGTATGGAGTACCTCCTTATGCTCCATATGCTCCACCTCCGTATGGAGCACCTCATTCATATGCTCCACCTACGTATGGAGCACCTCCTCCAGTTGCACCTTTATCTGTTGGATCTGAAAACCAAGCTGAGGAAAATCCTGTGCCGAAGGAAAAGCGTCCAAAGAGGCTAGAGTGGACGAAGGAAGACGAGGAAAAGCTGGTTAATGCTTGGTTTATGCATTCTAATGATCCCATCTCCGGCAACAATAAGAGCGGATCAAGTTTCTGGGGCCAAATAGCGGCAACATATAACTCCACCTCCGACCCTATCCGTCATCGAACCGCCAAGCAACTTAAAGATCATTGGGTCACCTACAACCGGGAGGTGACCAAGTTCAATGGATTCTACCTCCAAGAAGAAAGGTTGCGTCAGAGCGGAGCTGACGATGCAATGGTCATGGATGCAACAATGGCGAGGTTCGAGGGTAAAATAGGGCATCCATTTAAGCGCCATCATTGGTGGCAAGTTGTTCGCCACGAGCCCAAGTGGTCAGCAAAGCATGATCTTGGTAGTGGATCTGATTCGACTGCGAATAAGAGAACCCGACTCGGAGTCTCTGGTGAATATAGTTCTGGAGGCACTGAAGACACCGAGGAGGAAGTGCCCCGACCAGTGGGGCATGATAGGGCAAAGGCGGCTGCGGGAAAGACAAAGACGAAGGGGAAAGGGAAGGAAGCCACGAGCAGCGAATCAACAAGTGAAGCATTCAAAATGAAGAACTTGTGGGGTGGATTAGTGAAGGCCAAGCTTTTGAAGCAATGA
GRMZM2G328814_T01 from maize genome v3
Amino Acid Sequence
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MSGWSPDLNTFTDLLQSDGSPTTLPLDASLRCFSLTPPCTISGCASTTIPLSLSFVSISTVFIWSTSNFPSRNSSLIPVA
PLSVGSENQAEENPVPKEKRPKRLEWTKEDEEKLVNAWFMHSNDPISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLK
DHWVTYNREVTKFNGFYLQEERLRQSGADDAMVMDATMARFEGKIGHPFKRHHWWQVVRHEPKWSAKHDLGSGSDSTANK
RTRLGVSGEYSSGGTEDTEEEVPRPVGHDRAKAAAGKTKTKGKGKEATSSESTSEAFKMKNLWGGLVKAKLLKQ
Nucleotide Sequence
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ATGTCGGGTTGGTCCCCAGATTTGA...
ATGTCGGGTTGGTCCCCAGATTTGAACACCTTCACGGATCTCTTGCAGTCCGATGGGTCACCTACAACCCTTCCGTTAGATGCGTCGCTCCGATGTTTCAGCCTCACTCCCCCGTGCACTATTTCCGGTTGCGCGTCCACCACCATACCCTTATCCCTATCATTTGTATCAATATCCACCGTCTTCATATGGTCAACCTCCAACTTCCCAAGCCGGAATTCAAGCCTCATTCCCGTTGCACCTTTATCTGTTGGATCTGAAAACCAAGCTGAGGAAAATCCTGTGCCGAAGGAAAAGCGTCCAAAGAGGCTAGAGTGGACGAAGGAAGACGAGGAAAAGCTGGTTAATGCTTGGTTTATGCATTCTAATGATCCCATCTCCGGCAACAATAAGAGCGGATCAAGTTTCTGGGGCCAAATAGCGGCAACATATAACTCCACCTCCGACCCTATCCGTCATCGAACCGCCAAGCAACTTAAAGATCATTGGGTCACCTACAACCGGGAGGTGACCAAGTTCAATGGATTCTACCTCCAAGAAGAAAGGTTGCGTCAGAGCGGAGCTGACGATGCAATGGTCATGGATGCAACAATGGCGAGGTTCGAGGGTAAAATAGGGCATCCATTTAAGCGCCATCATTGGTGGCAAGTTGTTCGCCACGAGCCCAAGTGGTCAGCAAAGCATGATCTTGGTAGTGGATCTGATTCGACTGCGAATAAGAGAACCCGACTCGGAGTCTCTGGTGAATATAGTTCTGGAGGCACTGAAGACACCGAGGAGGAAGTGCCCCGACCAGTGGGGCATGATAGGGCAAAGGCGGCTGCGGGAAAGACAAAGACGAAGGGGAAAGGGAAGGAAGCCACGAGCAGCGAATCAACAAGTGAAGCATTCAAAATGAAGAACTTGTGGGGTGGATTAGTGAAGGCCAAGCTTTTGAAGCAATGAAACATTCTAAAGGGCCGATCAACCAGAGATATGGACCCGGCTGAAAGACGTATCCATGGCAGAGCCGTAAAGATGGTCGAAAAAGAACTTGGTCTGCTAGATGACGAAGAAGAGGAACCGGAAGCGGAACGTGAAGAGGAGGAAGATGAGGATGAGATCGAGGAGTCCGATTAGAGTT
Zm00001d016914_T001 from maize genome v4
Amino Acid Sequence
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MHSNDPISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNREVTKFNGFYLQEERLRQSGADDAMVMDATMA
RFEGKIGHPFKRHHWWQVVRHEPKWSAKHDLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPVGHDRAKAAAGKTK
TKGKGKEATSSESTSEAFKMKNLWGGLVKAKLLKQ
Nucleotide Sequence
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TCACTCCCCCGTGCACTATTTCCGG...
TCACTCCCCCGTGCACTATTTCCGGTTGCGCGTCCACCACCATACCCTTATCCCTATCATTTGTATCAATATCCACCGTCTTCATATGGTCAACCTCCAACTTCCCAAGCCGGAATTCAAGCCTCATTCCCGGTACGTTCGTATGCCCCTCCCCCACCTGCTGCGGACGGAAGTCAAGCTTCTTTCCAGATACCTTCATACGCCCCTCCTCCATATGCTCCACCTCCGTATGGAGTACCTCCTTATGCTCCATATGCTCCACCTCCGTATGGAGCACCTCATTCATATGCTCCACCTACGTATGGAGCACCTCCTCCAGTTGCACCTTTATCTGTTGGATCTGAAAACCAAGCTGAGGAAAATCCTGTGCCGAAGGAAAAGCGTCCAAAGAGGCTAGAGTGGACGAAGGAAGACGAGGAAAAGCTGGTTAATGCTTGGTTTATGCATTCTAATGATCCCATCTCCGGCAACAATAAGAGCGGATCAAGTTTCTGGGGCCAAATAGCGGCAACATATAACTCCACCTCCGACCCTATCCGTCATCGAACCGCCAAGCAACTTAAAGATCATTGGGTCACCTACAACCGGGAGGTGACCAAGTTCAATGGATTCTACCTCCAAGAAGAAAGGTTGCGTCAGAGCGGAGCTGACGATGCAATGGTCATGGATGCAACAATGGCGAGGTTCGAGGGTAAAATAGGGCATCCATTTAAGCGCCATCATTGGTGGCAAGTTGTTCGCCACGAGCCCAAGTGGTCAGCAAAGCATGATCTTGGTAGTGGATCTGATTCGACTGCGAATAAGAGAACCCGACTCGGAGTCTCTGGTGAATATAGTTCTGGAGGCACTGAAGACACCGAGGAGGAAGTGCCCCGACCAGTGGGGCATGATAGGGCAAAGGCGGCTGCGGGAAAGACAAAGACGAAGGGGAAAGGGAAGGAAGCCACGAGCAGCGAATCAACAAGTGAAGCATTCAAAATGAAGAACTTGTGGGGTGGATTAGTGAAGGCCAAGCTTTTGAAGCAATGAAACATTCTAAAGGGCCGATCAACCAGAGATATGGACCCGGCTGAAAGACGTATCCATGGCAGAGCCGTAAAGATGGTCGAAAAAGAACTTGGTCTGCTAGATGACGAAGAAGAGGAACCGGAAGCGGAACGTGAAGAGGAGGAAGATGAGGATGAGATCGAGGAGTCCGATTAGAGTTATGTAATTTTATTTTAATT
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